Welcome to the NIfTI-MRS documentation!

Contents:

• Introduction to NIfTI-MRS
  • The Problem
  • The NIfTI file format
  • Aims of NIfTI-MRS
  • What NIfTI-MRS doesn’t cover
• Overview of NIfTI-MRS
  • File structure
• What’s in the header extension?
  • 1. Required metadata
  • 2. Standard defined metadata
  • 3. User defined metadata
  • 4. Higher dimension metadata
  • Example header extensions
• Encoding spatial orientation & position
  • Using the NIfTI headers
  • Volume localisation in MRSI
  • Image-selected in vivo spectroscopy (ISIS)
• NIfTI-MRS Software
  • Conversion
  • I/O libraries
  • Visualisation
  • MRS analysis